Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932720.1_cds_XP_016479152.1_70722
CDS Infomation

[gene=LOC107800490] [db_xref=GeneID:107800490] [protein=golgin candidate 5-like] [partial=3'] [protein_id=XP_016479152.1] [location=complement(join(<9..95,190..249,326..610,1700..1747,1833..1894,3912..4026,6173..6247,7249..7320,8090..9189,9636..9786))] [gbkey=CDS]
Sequence

ATGGCGTGGTTTAGTGGGAAACTTGATTTGGGGAACTTGGATCTTGCCGGTGCCGTCAAT
AAGCTCAGTGAGAGCGTCAAAAACATTGAAAAGAATTTCGATACCGCACTTGGTCTCGAG
GAGAAATCTGATGAATCTACTAGCACTGAAGGTTCAGGATTATGGCCTTCAAGTACGGAT
AGGAAGGCCTTGTTTGATCCTGTCATGGCTTTTATGGGACAAAAAGGTGGGGAGACTGCT
GTAGAATCTATAGAGAAAGCTGAGTCATCAAAGCCCGCCTTGCCCACAGAGGAGGTAGTT
GAAGATTCAGCTGAATCTACAGTTCAACATGATGTAGTTCCTAAAGAACCAAAAGAAGAA
ACAAGGGACGTAATTGAGCAAACTAAATCTGTTGAAGAAGCGAATGAAGAAGCACAGAAT
GTTGATGAGAAACCAAACCAAAAGATATCTGCTGAAGAAGAAAACGGGGAAGCAAGAGCT
GCTGATGTCAAACTAGACTCTGCTATGGAAACAAAGGTTGAGAGGGAAGAGCAAAGAAGT
GCTACCAGACCAGATGAAAGAAAAGCTGAAATTGATTCAGTGGCTGAAGCGTCAGAAGTC
AATTTAGATCATGCTCGGGAAAAATCTCCAGAAATCCCCCAAAAGAATATTCCGGAGGAA
GAATCATCCGAAAATCTGGAGTTGATTGCCTCCCAAACATCAAATGCTTTATCTCAAACT
GAAGTTGGTATCCCCCTGCTTGTTGACTCACAGGAAAATACCGACGATGACAGGGAACAG
AAGAAAGAAGTCACTGATGAATCTCCTCTAGTTCAATCACAGGATGCATCAAGTGACCGA
GCAGACAGGGAAGAGAAGAAAGAAGTGACCGAGGAGTCTCCTCCAGTTCAATCACAGGAT
GCGTCAAGTGACCGAGTAGAAAGTGGAAGACCTTCTGTTTCCGATTCTGTAACTGCCAGT
GAAGATGGCAGTGTTGAAGAGCATTCTAACAGGAGCTTTCTTGGTGACCAGCACACAGAT
GAAGGTCGGAAGAGGGTATCTGAATCAGTTATGCATGAAAATGAGTCAGTTAGTAGACCT
GTTGGGGCTACCCAGCGAGGAAATGATTATGAGACTGACATGAAAGAACAACGGTTGAGC
TCCGGAAGCAACTCTTCAGATGTTACAGACACAGTGGTTGAACTGGAGAAGCTGAAGAAG
GAAATGAAAATGATGGAAACTGCATTACAAGGAGCTGCTAGACAAGCACAGGCGAAAGCT
GATGAAATTGCGAAGTTGATGAATGAGAACGAGCAATTGAAGTCTGCTATTGAGGATCTG
AGAAGGAAGTCCAATGATGCAGAAGTTGAATCTCTGCGAGAAGAGTACCATCAAAAAGTG
TCTGCTCTTGAGAGAAAGGTTTATGCTCTAACCCGGGAGAGGGATACACTACGCAGGGAA
CATAATAAGAAAAGTGATGCTGCAGCTCTTCTCAAAGAGAAGGATGAGATAATTACTCAA
GTAATGGCTGAAGGTGAGCAGCTTTCTAAAAAGCAAGCTGCCCAAGAAGCTCAGATGAGA
AAATTAAGGGCACAGATCAGAGAGCTTGAAGAAGAGAAGAAAGGATTACTTACCAAGCTT
GAGGTTGAAGAGAATAAAGTAGAGAGTATAAAGAGAGATAAGGCTGCAACGGAAAAACTG
CTTCATGGAACAGTAGAAAAACATCAAGCAGAACTTGCAATGCAAAAAGATTACTATACT
AATGCGTTAAATGCCGCAAGAGAAGCTGAAGCTTTAGCTGAGGCACGGGCTAACAATGAA
GCCAGAACTCAACTAGAGGGTCGCCTAAGAGAGGCTGAAGACCGTGAAGCCATGTTTGTT
CAGGCACTTGAAGAATTAAGGCAAACACTAAGCAGAACGGAGCAGCAGGCAGTTTTTAGG
GAAGATATGTTGCGCAGAGACATTGAGGATCTCCAGAAAAGATACCAAGCCAGCGAGCGT
AGATGTGAGGAGTTGATAATACAAGTTCCTGAATCTACCAGACCTCTTCTCAGGCAGATA
GAAGCCATGCAGGTT

Peptide Sequence

PEP ID

XP_016479152.1
PEP Infomation

PREDICTED: golgin candidate 5-like, partial [Nicotiana tabacum]
Sequence

MAWFSGKLDLGNLDLAGAVNKLSESVKNIEKNFDTALGLEEKSDESTSTEGSGLWPSSTD
RKALFDPVMAFMGQKGGETAVESIEKAESSKPALPTEEVVEDSAESTVQHDVVPKEPKEE
TRDVIEQTKSVEEANEEAQNVDEKPNQKISAEEENGEARAADVKLDSAMETKVEREEQRS
ATRPDERKAEIDSVAEASEVNLDHAREKSPEIPQKNIPEEESSENLELIASQTSNALSQT
EVGIPLLVDSQENTDDDREQKKEVTDESPLVQSQDASSDRADREEKKEVTEESPPVQSQD
ASSDRVESGRPSVSDSVTASEDGSVEEHSNRSFLGDQHTDEGRKRVSESVMHENESVSRP
VGATQRGNDYETDMKEQRLSSGSNSSDVTDTVVELEKLKKEMKMMETALQGAARQAQAKA
DEIAKLMNENEQLKSAIEDLRRKSNDAEVESLREEYHQKVSALERKVYALTRERDTLRRE
HNKKSDAAALLKEKDEIITQVMAEGEQLSKKQAAQEAQMRKLRAQIRELEEEKKGLLTKL
EVEENKVESIKRDKAATEKLLHGTVEKHQAELAMQKDYYTNALNAAREAEALAEARANNE
ARTQLEGRLREAEDREAMFVQALEELRQTLSRTEQQAVFREDMLRRDIEDLQKRYQASER
RCEELIIQVPESTRPLLRQIEAMQV

Transcript Sequence

Gene sequence data has not been registered.